next up previous
Next: Additional Constructs Up: A Reference Data Previous: Basic Constructs

Derived Constructs

Derived attributes have values that are derived from the values of other attributes using derivation expressions , such as arithmetic expressions, aggregate functions ( min, max, sum, avg, count), and attribute composition. Arithmetic expression and aggregate function derivations are straightforward and are not further discussed here.

An attribute A of a class , can be defined as a composition of other attributes by associating it with (a composition derivation consisting of) one path or a union of paths of the following form: [] [] [], where each (1 k n) denotes a class, and each (1 k n) denotes an attribute associated with () and takes values from value class that either includes or is a superclass of .

For example, the following derived attribute can be associated with class Connection shown in figure 1: right_fragment [Fragment] owner.

We consider only two types of derived (virtual) classes: derived subclasses of one or several object classes and derived superclasses of several classes (e.g., see [1]).

A derived subclass, , of one or (intersection of) several object classes, , , (m 1), and/or associated with a condition, consists of the subset of objects that belong to the intersection of classes , , and satisfy the associated condition. For example, a class of fragments longer than 100 base pairs, Long_Fragment, can be specified as a derived subclass of class Fragment shown in figure 1, associated with condition: length > 100.

A derived superclass, , of object classes , , (m 2), consists of the union of objects belonging to these classes. For example, a class Contig_or_Fragment can be defined as a derived superclass of classes Contig_Map and Fragment shown in figure 1.



next up previous
Next: Additional Constructs Up: A Reference Data Previous: Basic Constructs



VMMarkowitz@lbl.gov
Jul 13, 1995